Here's a topic to start fixing the game properly as the Developers lack the ability to make a organised system for the community to use.

I will edit this section with more as I think of at the time. Doesn't have to be insane things just stuff you spot as you go. Will add more myself overtime.

Eventually we can all list the top 10 here or somewhere else and then get things sorted.

My Personal List:
Put the Lyceum Warp Beacon back.
More hotkey bindings (switch sets)
Visuals glitching in and out at 0,0 of a sector.
Scrolling of texture on planets when using a holoprojector that uses texture scrolling.
Low resolution particle effects (need improving)
Star Sonata password wipes on failed server connection (switches to steam and back)
Adding a text log file of the chat so no more packet sniffing hacking tools.
Introduction on creating a character (friendly way, not some empty textbox).
Option to skip The Nexus.